Basic Information
Locus ID:
gene:TRIDC2BG017260
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2B | 112366630 | 112369855 | + | gene:TRIDC2BG017260 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.38 | 103,371.81 Da | 43.41 | 105.67 | 0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 503 | 561 | 2.6E-6 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 70 | 126 | 1.9E-6 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 214 | 274 | 3.6E-7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 25 | 61 | 1.8E-7 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 669 | 879 | 9.6E-40 | IPR000719 |
| Pfam | PF13516 | Leucine Rich repeat | 332 | 348 | 0.57 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 315 | 566 | 1.88E-43 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 72 | 395 | 3.61E-61 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 669 | 947 | 4.1E-69 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 25 | 309 | 5.2E-72 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 651 | 751 | 2.1E-18 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 312 | 594 | 3.0E-72 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 752 | 962 | 6.4E-57 | - |
| SMART | SM00220 | serkin_6 | 666 | 964 | 1.8E-29 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 163 | 188 | 120.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 261 | 285 | 68.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 114 | 138 | 40.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 90 | 113 | 220.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 213 | 237 | 21.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 525 | 549 | 210.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 666 | 956 | 35.24102 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 796 | 808 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G28440.1 | HAESA-like 1. | 0 |
| RefSeq | XP_037483668.1 | receptor-like protein kinase HSL1 [Triticum dicoccoides] | 0 |
| Q9SGP2 | Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana OX=3702 GN=HSL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6C0R8 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2BG017260.