Basic Information
Locus ID:
gene:TRIDC2BG013290
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
breast cancer carboxy-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2B | 78912297 | 78918140 | + | gene:TRIDC2BG013290 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.05 | 153,794.42 Da | 43.60 | 69.96 | -0.58 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd15489 | PHD_SF | 1359 | 1415 | 1.0723E-8 | - |
| CDD | cd17738 | BRCT_TopBP1_rpt7 | 1113 | 1185 | 8.93073E-21 | - |
| Pfam | PF00628 | PHD-finger | 1360 | 1416 | 4.9E-7 | IPR019787 |
| Pfam | PF12738 | twin BRCT domain | 69 | 132 | 3.8E-20 | IPR001357 |
| SUPERFAMILY | SSF52113 | BRCT domain | 1115 | 1216 | 3.93E-15 | IPR036420 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 1356 | 1421 | 1.15E-8 | IPR011011 |
| SUPERFAMILY | SSF52113 | BRCT domain | 68 | 149 | 1.44E-20 | IPR036420 |
| SUPERFAMILY | SSF52113 | BRCT domain | 5 | 55 | 1.57E-5 | IPR036420 |
| Gene3D | G3DSA:3.40.50.10190 | BRCT domain | 1111 | 1222 | 5.3E-25 | IPR036420 |
| Gene3D | G3DSA:3.40.50.10190 | BRCT domain | 57 | 174 | 9.6E-30 | IPR036420 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 1350 | 1430 | 1.9E-9 | IPR013083 |
| Gene3D | G3DSA:3.40.50.10190 | BRCT domain | 1223 | 1324 | 2.9E-13 | IPR036420 |
| SMART | SM00292 | BRCT_7 | 1106 | 1185 | 8.5E-4 | IPR001357 |
| SMART | SM00292 | BRCT_7 | 57 | 140 | 2.1E-13 | IPR001357 |
| SMART | SM00292 | BRCT_7 | 1223 | 1310 | 0.57 | IPR001357 |
| SMART | SM00249 | PHD_3 | 1359 | 1416 | 0.0016 | IPR001965 |
| ProSiteProfiles | PS50016 | Zinc finger PHD-type profile. | 1357 | 1418 | 9.1874 | IPR019787 |
| ProSiteProfiles | PS50172 | BRCT domain profile. | 67 | 150 | 16.928381 | IPR001357 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 408 | 450 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 161 | 181 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 672 | 715 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 268 | 294 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1009 | 1050 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 788 | 805 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 964 | 1066 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 928 | 949 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 964 | 1001 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 279 | 293 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 786 | 805 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G02110.1 | transcription coactivators. | 0 |
| RefSeq | XP_037483392.1 | BRCT domain-containing protein At4g02110-like [Triticum dicoccoides] | 0 |
| O04251 | BRCT domain-containing protein At4g02110 OS=Arabidopsis thaliana OX=3702 GN=At4g02110 PE=4 SV=3 | 0 | |
| TrEMBL | A0A3B6BZY3 | BRCT domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2BG013290.