Basic Information
Locus ID:
gene:TRIDC2BG013000
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
cellular macromolecule catabolic process
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2B | 76479027 | 76542789 | + | gene:TRIDC2BG013000 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.90 | 13,332.06 Da | 35.97 | 91.08 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00240 | Ubiquitin family | 3 | 81 | 5.5E-19 | IPR000626 |
| Pfam | PF01020 | Ribosomal L40e family | 95 | 115 | 4.0E-6 | IPR001975 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 1 | 85 | 1.21E-19 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 1 | 94 | 1.2E-28 | - |
| SMART | SM00213 | ubq_7 | 1 | 81 | 1.1E-16 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 1 | 85 | 18.628063 | IPR000626 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G36170.1 | Ubiquitin supergroup;Ribosomal protein L40e. | 0 |
| RefSeq | XP_044319278.1 | ubiquitin-60S ribosomal protein L40-like [Triticum aestivum] | 0 |
| P49636 | Ubiquitin-ribosomal protein eL40 fusion protein OS=Nicotiana sylvestris OX=4096 GN=UBICEP52-7 PE=2 SV=2 | 0 | |
| TrEMBL | A0A3B6BZS4 | Ubiquitin-like domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2BG013000.