Basic Information
Locus ID:
gene:TRIDC2BG012960
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
cellular macromolecule catabolic process
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2B | 76336222 | 76336570 | - | gene:TRIDC2BG012960 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.43 | 12,617.16 Da | 36.40 | 80.69 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00240 | Ubiquitin family | 14 | 93 | 3.7E-18 | IPR000626 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 9 | 97 | 2.14E-20 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 7 | 107 | 1.3E-29 | - |
| SMART | SM00213 | ubq_7 | 12 | 93 | 2.0E-16 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 12 | 97 | 18.867594 | IPR000626 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G05050.4 | ubiquitin 11. polyubiquitin gene, belongs to a subtype group with UBQ10 and UBQ14. Various ecotypes of Arabidopsis have different numbers of ubiquitin repeats within this gene. | 0 |
| RefSeq | XP_044452681.1 | ubiquitin-60S ribosomal protein L40-like [Triticum aestivum] | 0 |
| P69313 | Ubiquitin OS=Helianthus annuus OX=4232 PE=3 SV=2 | 0 | |
| TrEMBL | A0A453AL71 | Ubiquitin-like domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2BG012960.