Basic Information
Locus ID:
gene:TRIDC2BG012010
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
PAN-like domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2B | 69366013 | 69369461 | + | gene:TRIDC2BG012010 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.76 | 87,393.33 Da | 38.89 | 82.99 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01098 | PAN_AP_plant | 348 | 444 | 3.5327E-16 | - |
| CDD | cd00028 | B_lectin | 34 | 160 | 1.22645E-32 | IPR001480 |
| CDD | cd14066 | STKc_IRAK | 540 | 798 | 2.58076E-89 | - |
| Pfam | PF08276 | PAN-like domain | 358 | 427 | 1.8E-14 | IPR003609 |
| Pfam | PF00954 | S-locus glycoprotein domain | 222 | 334 | 5.7E-22 | IPR000858 |
| Pfam | PF01453 | D-mannose binding lectin | 77 | 189 | 3.5E-30 | IPR001480 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 539 | 798 | 1.6E-46 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 515 | 798 | 1.62E-80 | IPR011009 |
| SUPERFAMILY | SSF51110 | alpha-D-mannose-specific plant lectins | 78 | 194 | 9.68E-26 | IPR036426 |
| Gene3D | G3DSA:2.90.10.10 | - | 23 | 159 | 2.2E-22 | IPR036426 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 500 | 608 | 1.1E-35 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 609 | 799 | 2.5E-55 | - |
| SMART | SM00108 | blect_4 | 33 | 161 | 1.0E-33 | IPR001480 |
| SMART | SM00220 | serkin_6 | 534 | 799 | 1.1E-26 | IPR000719 |
| PIRSF | PIRSF000641 | SRK | 3 | 799 | 6.7E-254 | IPR024171 |
| ProSiteProfiles | PS50948 | PAN/Apple domain profile. | 357 | 444 | 8.973928 | IPR003609 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 534 | 799 | 37.50246 | IPR000719 |
| ProSiteProfiles | PS50927 | Bulb-type lectin domain profile. | 27 | 159 | 18.489161 | IPR001480 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 654 | 666 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 540 | 561 | - | IPR017441 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G61610.1 | S-locus lectin protein kinase family protein. | 0 |
| RefSeq | XP_037488676.1 | receptor-like serine/threonine-protein kinase SD1-8 [Triticum dicoccoides] | 0 |
| Q9SY89 | Putative G-type lectin S-receptor-like serine/threonine-protein kinase At1g61610 OS=Arabidopsis thaliana OX=3702 GN=At1g61610 PE=3 SV=1 | 0 | |
| TrEMBL | A0A3B6BZG5 | Receptor-like serine/threonine-protein kinase OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2BG012010.