Basic Information
Locus ID:
gene:TRIDC2BG011490
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
WD40 repeats
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2B | 63243312 | 63253255 | - | gene:TRIDC2BG011490 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.09 | 106,645.89 Da | 43.26 | 92.87 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12894 | Anaphase-promoting complex subunit 4 WD40 domain | 597 | 642 | 1.6E-4 | IPR024977 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 35 | 650 | 1.63E-25 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 481 | 827 | 2.6E-15 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 24 | 166 | 4.2E-7 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 183 | 362 | 2.8E-5 | IPR015943 |
| SMART | SM00320 | WD40_4 | 233 | 275 | 1.8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 587 | 626 | 0.55 | IPR001680 |
| SMART | SM00320 | WD40_4 | 520 | 559 | 1.2 | IPR001680 |
| SMART | SM00320 | WD40_4 | 19 | 61 | 6.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 466 | 506 | 220.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 62 | 102 | 360.0 | IPR001680 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G05570.2 | transducin family protein / WD-40 repeat family protein. | 0 |
| RefSeq | XP_037483308.1 | uncharacterized protein LOC119362213 isoform X1 [Triticum dicoccoides] | 0 |
| Q8K400 | Syntaxin-binding protein 5 OS=Mus musculus OX=10090 GN=Stxbp5 PE=1 SV=3 | 0 | |
| TrEMBL | A0A3B6BZM8 | V-SNARE coiled-coil homology domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2BG011490.