Basic Information
Locus ID:
gene:TRIDC2BG009570
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Wall-associated receptor kinase galacturonan-binding
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2B | 48626157 | 48628371 | + | gene:TRIDC2BG009570 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.89 | 27,091.98 Da | 41.06 | 89.05 | -0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00054 | EGF_CA | 14 | 38 | 1.36297E-4 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 116 | 241 | 9.8E-24 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 95 | 243 | 3.79E-32 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 86 | 190 | 1.4E-23 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 191 | 243 | 9.0E-8 | - |
| SMART | SM00219 | tyrkin_6 | 112 | 243 | 4.1E-4 | IPR020635 |
| ProSiteProfiles | PS50026 | EGF-like domain profile. | 11 | 46 | 8.674517 | IPR000742 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 112 | 243 | 19.566416 | IPR000719 |
| ProSitePatterns | PS00010 | Aspartic acid and asparagine hydroxylation site. | 20 | 31 | - | IPR000152 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 118 | 142 | - | IPR017441 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21250.1 | cell wall-associated kinase. cell wall-associated kinase, may function as a signaling receptor of extracellular matrix component such as oligogalacturonides. | 0 |
| RefSeq | XP_037488620.1 | wall-associated receptor kinase 3-like [Triticum dicoccoides] | 0 |
| Q39191 | Wall-associated receptor kinase 1 OS=Arabidopsis thaliana OX=3702 GN=WAK1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A3B6BZ30 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2BG009570.