Basic Information
Locus ID:
gene:TRIDC2BG009420
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
EGF domain, unclasssified subfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2B | 47435738 | 47440822 | + | gene:TRIDC2BG009420 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.54 | 60,285.26 Da | 34.58 | 79.22 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00054 | EGF_CA | 139 | 177 | 3.77278E-4 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 255 | 519 | 2.6E-41 | IPR001245 |
| SUPERFAMILY | SSF57184 | Growth factor receptor domain | 99 | 180 | 2.35E-9 | IPR009030 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 233 | 518 | 1.16E-65 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 327 | 535 | 4.4E-46 | - |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 99 | 184 | 5.8E-10 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 234 | 326 | 8.5E-23 | - |
| SMART | SM00220 | serkin_6 | 251 | 524 | 2.4E-22 | IPR000719 |
| SMART | SM00181 | egf_5 | 82 | 138 | 36.0 | IPR000742 |
| SMART | SM00181 | egf_5 | 142 | 185 | 0.31 | IPR000742 |
| SMART | SM00179 | egfca_6 | 139 | 185 | 4.7E-5 | IPR001881 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 251 | 528 | 32.23048 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 375 | 387 | - | IPR008271 |
| ProSitePatterns | PS01187 | Calcium-binding EGF-like domain signature. | 139 | 168 | - | IPR018097 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 257 | 279 | - | IPR017441 |
| ProSitePatterns | PS00010 | Aspartic acid and asparagine hydroxylation site. | 159 | 170 | - | IPR000152 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21210.1 | wall associated kinase 4. cell wall-associated ser/thr kinase involved in cell elongation and lateral root development | 0 |
| RefSeq | XP_037483236.1 | wall-associated receptor kinase 3-like [Triticum dicoccoides] | 0 |
| Q9LMN6 | Wall-associated receptor kinase 4 OS=Arabidopsis thaliana OX=3702 GN=WAK4 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6BZ50 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2BG009420.