Basic Information
Locus ID:
gene:TRIDC2BG008280
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Domain Homologous to E6-AP Carboxyl Terminus with
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2B | 41565275 | 41575639 | + | gene:TRIDC2BG008280 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.70 | 196,553.09 Da | 48.96 | 86.31 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00078 | HECTc | 1419 | 1826 | 1.32138E-122 | IPR000569 |
| Pfam | PF00632 | HECT-domain (ubiquitin-transferase) | 1467 | 1831 | 9.4E-83 | IPR000569 |
| SUPERFAMILY | SSF56204 | Hect, E3 ligase catalytic domain | 1411 | 1824 | 1.57E-96 | IPR035983 |
| SUPERFAMILY | SSF48371 | ARM repeat | 147 | 609 | 1.23E-38 | IPR016024 |
| Gene3D | G3DSA:3.30.2410.10 | Hect, E3 ligase catalytic domain | 1704 | 1829 | 5.1E-33 | - |
| Gene3D | G3DSA:3.90.1750.10 | Hect, E3 ligase catalytic domains | 1359 | 1593 | 1.4E-44 | - |
| Gene3D | G3DSA:1.25.10.10 | - | 141 | 431 | 5.1E-51 | IPR011989 |
| SMART | SM00185 | arm_5 | 261 | 301 | 57.0 | IPR000225 |
| SMART | SM00119 | hect_3 | 1433 | 1831 | 4.7E-94 | IPR000569 |
| SMART | SM00185 | arm_5 | 304 | 342 | 22.0 | IPR000225 |
| SMART | SM00185 | arm_5 | 178 | 219 | 24.0 | IPR000225 |
| ProSiteProfiles | PS50237 | HECT domain profile. | 1443 | 1831 | 59.513 | IPR000569 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1087 | 1122 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 627 | 680 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1041 | 1057 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 939 | 1122 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 52 | 95 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 99 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 939 | 963 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 988 | 1030 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 644 | 680 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 972 | 987 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G38600.1 | HEAT repeat ;HECT-domain (ubiquitin-transferase). encodes a member of HECT ubiquitin protein ligase family that is involved in trichome cell morphogenesis. Mutants in this gene exhibit supernumerary trichome branches and increased DNA content. | 0 |
| RefSeq | XP_044321738.1 | E3 ubiquitin-protein ligase UPL3-like [Triticum aestivum] | 0 |
| Q6WWW4 | E3 ubiquitin-protein ligase UPL3 OS=Arabidopsis thaliana OX=3702 GN=UPL3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6AR18 | HECT-type E3 ubiquitin transferase OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2BG008280.