Basic Information
Locus ID:
gene:TRIDC2BG008240
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
RING-like zinc finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2B | 41258316 | 41261293 | + | gene:TRIDC2BG008240 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.55 | 22,099.39 Da | 35.37 | 88.76 | 0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16486 | mRING-H2-C3H2C2D_ZSWM2 | 153 | 195 | 1.04538E-20 | - |
| Pfam | PF13639 | Ring finger domain | 152 | 195 | 3.0E-13 | IPR001841 |
| Pfam | PF02225 | PA domain | 3 | 64 | 8.5E-9 | IPR003137 |
| SUPERFAMILY | SSF52025 | PA domain | 4 | 71 | 1.83E-7 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 144 | 199 | 7.66E-19 | - |
| Gene3D | G3DSA:3.50.30.30 | - | 1 | 83 | 2.0E-18 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 115 | 199 | 1.0E-20 | IPR013083 |
| SMART | SM00184 | ring_2 | 153 | 194 | 1.1E-9 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 153 | 195 | 12.710573 | IPR001841 |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G66160.2 | receptor homology region transmembrane domain ring H2 motif protein 1. Encodes a receptor homology region transmembrane domain, ring H2 motif protein involved in transport of storage proteins to protein storage vacuoles. Co-localizes with DIP positive vesicles. | 0 |
| RefSeq | XP_037483124.1 | receptor homology region, transmembrane domain- and RING domain-containing protein 1-like [Triticum dicoccoides] | 0 |
| Q9M622 | Receptor homology region, transmembrane domain- and RING domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=RMR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6U3D3 | RING-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2BG008240.