Basic Information
Locus ID:
gene:TRIDC2BG007610
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
WD domain, G-beta repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2B | 36815444 | 36819449 | + | gene:TRIDC2BG007610 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.90 | 40,863.80 Da | 40.77 | 81.92 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 291 | 327 | 0.092 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 68 | 102 | 4.6E-7 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 112 | 144 | 0.18 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 160 | 188 | 0.033 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 62 | 367 | 1.67E-56 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 48 | 370 | 2.2E-73 | IPR015943 |
| SMART | SM00320 | WD40_4 | 191 | 237 | 4.2 | IPR001680 |
| SMART | SM00320 | WD40_4 | 286 | 327 | 0.14 | IPR001680 |
| SMART | SM00320 | WD40_4 | 107 | 146 | 0.0011 | IPR001680 |
| SMART | SM00320 | WD40_4 | 62 | 102 | 3.5E-10 | IPR001680 |
| SMART | SM00320 | WD40_4 | 330 | 370 | 4.9 | IPR001680 |
| SMART | SM00320 | WD40_4 | 149 | 188 | 1.9E-4 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 69 | 103 | 14.117617 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 69 | 103 | 11.681953 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 155 | 197 | 11.143396 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 155 | 192 | 8.834696 | - |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 89 | 103 | - | IPR019775 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 21 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G54520.1 | Transducin/WD40 repeat-like superfamily protein. | 0 |
| RefSeq | XP_037483102.1 | WD repeat-containing protein 25-like [Triticum dicoccoides] | 0 |
| Q64LD2 | WD repeat-containing protein 25 OS=Homo sapiens OX=9606 GN=WDR25 PE=1 SV=3 | 0 | |
| TrEMBL | A0A3B6BYT5 | WD_REPEATS_REGION domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2BG007610.