Basic Information
Locus ID:
gene:TRIDC2BG005620
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Wall-associated receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2B | 25440620 | 25443018 | + | gene:TRIDC2BG005620 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.01 | 81,984.14 Da | 36.20 | 87.98 | -0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00054 | EGF_CA | 335 | 363 | 2.33996E-6 | - |
| CDD | cd14066 | STKc_IRAK | 462 | 727 | 9.1641E-87 | - |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 54 | 114 | 9.7E-15 | IPR025287 |
| Pfam | PF07645 | Calcium-binding EGF domain | 335 | 365 | 5.4E-5 | IPR001881 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 459 | 723 | 1.5E-43 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 440 | 724 | 3.78E-72 | IPR011009 |
| SUPERFAMILY | SSF57196 | EGF/Laminin | 335 | 367 | 1.09E-6 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 532 | 740 | 6.3E-52 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 417 | 531 | 1.7E-28 | - |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 287 | 338 | 1.7E-6 | - |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 339 | 369 | 6.9E-9 | - |
| SMART | SM00220 | serkin_6 | 456 | 722 | 1.3E-30 | IPR000719 |
| SMART | SM00179 | egfca_6 | 335 | 375 | 2.5E-4 | IPR001881 |
| SMART | SM00181 | egf_5 | 287 | 334 | 3.8 | IPR000742 |
| SMART | SM00181 | egf_5 | 338 | 375 | 5.2 | IPR000742 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 456 | 734 | 36.541351 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 462 | 485 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 577 | 589 | - | IPR008271 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21210.1 | wall associated kinase 4. cell wall-associated ser/thr kinase involved in cell elongation and lateral root development | 0 |
| RefSeq | XP_037483009.1 | wall-associated receptor kinase 2-like [Triticum dicoccoides] | 0 |
| Q9LMN6 | Wall-associated receptor kinase 4 OS=Arabidopsis thaliana OX=3702 GN=WAK4 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6BY32 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2BG005620.