Basic Information
Locus ID:
gene:TRIDC2BG004930
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Legume lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2B | 22118788 | 22122226 | - | gene:TRIDC2BG004930 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.45 | 71,802.16 Da | 37.94 | 96.99 | 0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 344 | 610 | 1.58936E-92 | - |
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 25 | 254 | 6.60992E-86 | IPR001220 |
| Pfam | PF00139 | Legume lectin domain | 24 | 261 | 4.1E-62 | IPR001220 |
| Pfam | PF00069 | Protein kinase domain | 340 | 546 | 7.5E-49 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 315 | 608 | 1.19E-77 | IPR011009 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 9 | 256 | 2.33E-65 | IPR013320 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 415 | 618 | 1.3E-54 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 323 | 414 | 3.3E-34 | - |
| Gene3D | G3DSA:2.60.120.200 | - | 21 | 266 | 2.2E-60 | - |
| SMART | SM00220 | serkin_6 | 338 | 608 | 1.7E-40 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 338 | 614 | 37.036041 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 344 | 367 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 459 | 471 | - | IPR008271 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G53810.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_037482965.1 | L-type lectin-domain containing receptor kinase SIT2-like [Triticum dicoccoides] | 0 |
| Q7XUN6 | L-type lectin-domain containing receptor kinase SIT2 OS=Oryza sativa subsp. japonica OX=39947 GN=SIT2 PE=2 SV=2 | 0 | |
| TrEMBL | A0A3B6C0K7 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2BG004930.