Basic Information
Locus ID:
gene:TRIDC2BG002300
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Domain of unknown function
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2B | 10429723 | 10463139 | + | gene:TRIDC2BG002300 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.11 | 263,254.88 Da | 44.40 | 98.81 | 0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00931 | NB-ARC domain | 521 | 762 | 8.8E-28 | IPR002182 |
| Pfam | PF13962 | Domain of unknown function | 1856 | 1961 | 4.0E-22 | IPR026961 |
| Pfam | PF13962 | Domain of unknown function | 1523 | 1629 | 7.5E-21 | IPR026961 |
| Pfam | PF13962 | Domain of unknown function | 2002 | 2115 | 4.7E-27 | IPR026961 |
| Pfam | PF18052 | Rx N-terminal domain | 347 | 424 | 4.8E-7 | IPR041118 |
| Pfam | PF13962 | Domain of unknown function | 1679 | 1795 | 2.7E-26 | IPR026961 |
| Pfam | PF13962 | Domain of unknown function | 2173 | 2297 | 4.6E-25 | IPR026961 |
| Pfam | PF00069 | Protein kinase domain | 30 | 306 | 5.2E-44 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 9 | 311 | 2.87E-63 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 859 | 1217 | 1.02E-13 | - |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 521 | 775 | 8.02E-40 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 507 | 667 | 1.3E-23 | IPR027417 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 2 | 100 | 1.3E-24 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 902 | 1250 | 2.4E-15 | IPR032675 |
| Gene3D | G3DSA:1.10.10.10 | - | 755 | 871 | 3.8E-9 | IPR036388 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 121 | 329 | 3.5E-45 | - |
| Gene3D | G3DSA:1.20.5.4130 | - | 346 | 448 | 5.0E-9 | - |
| SMART | SM00220 | serkin_6 | 29 | 306 | 4.0E-25 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 29 | 318 | 34.308178 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 35 | 57 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 164 | 176 | - | IPR008271 |
| PRINTS | PR00364 | Disease resistance protein signature | 613 | 627 | 1.6E-7 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 541 | 556 | 1.6E-7 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 710 | 724 | 1.6E-7 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G00960.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_037482788.1 | uncharacterized protein LOC119361749 isoform X1 [Triticum dicoccoides] | 0 |
| F7J0N2 | Disease resistance protein RGA5 OS=Oryza sativa subsp. japonica OX=39947 GN=RGA5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6BXB9 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2BG002300.