Basic Information
Locus ID:
gene:TRIDC2BG001300
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Leucine rich repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2B | 4788282 | 4792361 | - | gene:TRIDC2BG001300 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.11 | 120,528.77 Da | 35.24 | 105.00 | 0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00560 | Leucine Rich Repeat | 126 | 147 | 1.3 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 492 | 547 | 1.5E-10 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 797 | 1008 | 4.5E-38 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 295 | 354 | 3.0E-10 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 785 | 1073 | 6.97E-68 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 46 | 402 | 1.36E-63 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 286 | 662 | 9.02E-71 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 778 | 877 | 2.5E-19 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 878 | 1090 | 5.7E-56 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 38 | 191 | 1.4E-30 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 393 | 699 | 1.3E-93 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 269 | 392 | 1.3E-35 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 197 | 268 | 1.2E-14 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 486 | 510 | 150.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 558 | 582 | 170.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 794 | 1073 | 1.8E-23 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 583 | 606 | 120.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 341 | 365 | 41.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 511 | 533 | 180.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 631 | 655 | 91.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 317 | 340 | 230.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 293 | 316 | 130.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 147 | 171 | 49.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 414 | 438 | 5.2 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 534 | 557 | 44.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 221 | 245 | 390.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 794 | 1078 | 35.891186 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 924 | 936 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 800 | 823 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 631 | 644 | 8.1E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 513 | 526 | 8.1E-5 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1099 | 1133 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1098 | 1133 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G24240.1 | Leucine-rich repeat receptor-like protein kinase family protein. | 0 |
| RefSeq | XP_037482731.1 | receptor-like protein kinase 2 [Triticum dicoccoides] | 0 |
| Q9LHP4 | LRR receptor-like serine/threonine-protein kinase RGI1 OS=Arabidopsis thaliana OX=3702 GN=RGI1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6BWJ4 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2BG001300.