Basic Information
Locus ID:
gene:TRIDC2BG001260
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2B | 4600661 | 4604415 | + | gene:TRIDC2BG001260 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.01 | 120,896.99 Da | 42.35 | 101.11 | 0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00560 | Leucine Rich Repeat | 154 | 175 | 1.1 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 562 | 578 | 1.1 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 639 | 698 | 6.9E-8 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 251 | 308 | 2.9E-10 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 805 | 1091 | 6.2E-43 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 60 | 96 | 7.7E-9 | IPR013210 |
| SUPERFAMILY | SSF52047 | RNI-like | 109 | 454 | 1.96E-65 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 467 | 723 | 6.12E-58 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 784 | 1095 | 1.19E-68 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 884 | 1113 | 3.3E-52 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 786 | 883 | 1.3E-21 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 412 | 735 | 3.3E-83 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 55 | 209 | 5.4E-40 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 316 | 411 | 1.2E-23 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 210 | 315 | 3.1E-29 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 224 | 247 | 230.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 802 | 1104 | 1.8E-39 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 175 | 199 | 23.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 685 | 710 | 120.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 295 | 318 | 6.2 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 342 | 366 | 150.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 367 | 390 | 170.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 127 | 151 | 74.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 613 | 637 | 28.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 272 | 294 | 150.0 | IPR003591 |
| SMART | SM00365 | LRR_sd22_2 | 515 | 541 | 34.0 | - |
| SMART | SM00369 | LRR_typ_2 | 539 | 563 | 10.0 | IPR003591 |
| SMART | SM00365 | LRR_sd22_2 | 661 | 684 | 240.0 | - |
| SMART | SM00369 | LRR_typ_2 | 491 | 515 | 79.0 | IPR003591 |
| SMART | SM00365 | LRR_sd22_2 | 271 | 297 | 22.0 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 802 | 1105 | 35.806381 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 297 | 319 | 8.689944 | IPR001611 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 928 | 940 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 808 | 831 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 295 | 308 | 8.3E-7 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 274 | 287 | 8.3E-7 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G47090.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_037482728.1 | LRR receptor-like serine/threonine-protein kinase EFR [Triticum dicoccoides] | 0 |
| Q1MX30 | Receptor kinase-like protein Xa21 OS=Oryza sativa subsp. indica OX=39946 GN=XA21 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6BWG2 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2BG001260.