Basic Information
Locus ID:
gene:TRIDC2BG001210
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2B | 4396117 | 4399302 | + | gene:TRIDC2BG001210 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.90 | 100,474.05 Da | 39.70 | 103.98 | 0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 432 | 493 | 6.1E-8 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 530 | 589 | 2.3E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 188 | 246 | 1.3E-8 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 697 | 787 | 5.0E-12 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 22 | 58 | 5.5E-9 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 670 | 908 | 7.94E-31 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 358 | 614 | 4.93E-59 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 22 | 318 | 1.22E-60 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 185 | 322 | 1.0E-35 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 19 | 184 | 1.9E-46 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 774 | 919 | 1.3E-11 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 325 | 633 | 2.9E-78 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 674 | 773 | 2.8E-20 | - |
| SMART | SM00365 | LRR_sd22_2 | 209 | 235 | 38.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 137 | 169 | 53.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 430 | 456 | 250.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 552 | 584 | 170.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 358 | 384 | 370.0 | - |
| SMART | SM00369 | LRR_typ_2 | 576 | 601 | 30.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 89 | 113 | 130.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 233 | 257 | 180.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 504 | 528 | 32.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 382 | 406 | 140.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 209 | 232 | 48.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 137 | 161 | 13.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 430 | 454 | 7.1 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 693 | 923 | 11.750315 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 139 | 161 | 7.480934 | IPR001611 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 209 | 222 | 2.1E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 140 | 153 | 2.1E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G47090.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_037488394.1 | receptor kinase-like protein Xa21 [Triticum dicoccoides] | 0 |
| Q1MX30 | Receptor kinase-like protein Xa21 OS=Oryza sativa subsp. indica OX=39946 GN=XA21 PE=1 SV=1 | 0 | |
| TrEMBL | M8D1K5 | Putative LRR receptor-like serine/threonine-protein kinase OS=Aegilops tauschii OX=37682 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2BG001210.