Basic Information
Locus ID:
gene:TRIDC2AG081770
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
CAP_GLY
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2A | 771610859 | 771620445 | + | gene:TRIDC2AG081770 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.14 | 30,362.60 Da | 45.27 | 67.23 | -0.72 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01789 | Ubl_TBCB | 44 | 123 | 5.21063E-30 | - |
| Pfam | PF14560 | Ubiquitin-like domain | 44 | 128 | 1.5E-26 | IPR000626 |
| Pfam | PF01302 | CAP-Gly domain | 190 | 256 | 2.0E-22 | IPR000938 |
| SUPERFAMILY | SSF74924 | Cap-Gly domain | 133 | 260 | 7.46E-36 | IPR036859 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 39 | 131 | 9.64E-20 | IPR029071 |
| Gene3D | G3DSA:2.30.30.190 | - | 177 | 268 | 4.3E-29 | IPR036859 |
| Gene3D | G3DSA:3.10.20.90 | - | 43 | 127 | 1.9E-28 | - |
| SMART | SM01052 | CAP_GLY_2 | 190 | 257 | 5.0E-27 | IPR000938 |
| ProSiteProfiles | PS50245 | CAP-Gly domain profile. | 210 | 252 | 15.727863 | IPR000938 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 41 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 12 | 35 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G10220.1 | tubulin folding cofactor B. Encodes a tubulin-binding cofactor. Homozygous mutant plants are embryo lethal. Heterozygous mutant plants showed increased ploidy and higher numbers of spindles and phragmoplasts, suggesting a role in cell division. | 0 |
| RefSeq | XP_037480227.1 | tubulin-folding cofactor B-like [Triticum dicoccoides] | 0 |
| Q67Z52 | Tubulin-folding cofactor B OS=Arabidopsis thaliana OX=3702 GN=TFCB PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6B8N5 | CAP-Gly domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2AG081770.