Basic Information
Locus ID:
gene:TRIDC2AG080440
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Leucine rich repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2A | 766464086 | 766467471 | - | gene:TRIDC2AG080440 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.33 | 110,393.47 Da | 39.64 | 106.32 | 0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 346 | 406 | 2.0E-6 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 706 | 926 | 2.3E-37 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 35 | 70 | 2.0E-10 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 371 | 626 | 3.13E-56 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 55 | 334 | 7.29E-46 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 678 | 1006 | 5.33E-63 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 339 | 644 | 2.4E-81 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 196 | 338 | 7.8E-30 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 34 | 191 | 4.5E-43 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 790 | 1016 | 7.5E-52 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 667 | 789 | 2.4E-21 | - |
| SMART | SM00369 | LRR_typ_2 | 418 | 441 | 360.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 171 | 195 | 40.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 515 | 539 | 350.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 394 | 417 | 46.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 242 | 266 | 240.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 563 | 586 | 53.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 466 | 490 | 100.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 704 | 1009 | 9.3E-23 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 99 | 123 | 11.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 704 | 1009 | 32.866512 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 710 | 737 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 839 | 851 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G47110.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_037480139.1 | receptor kinase-like protein Xa21 [Triticum dicoccoides] | 0 |
| Q1MX30 | Receptor kinase-like protein Xa21 OS=Oryza sativa subsp. indica OX=39946 GN=XA21 PE=1 SV=1 | 0 | |
| TrEMBL | M4QH69 | Receptor kinase-like protein XA21-like protein OS=Triticum aestivum OX=4565 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2AG080440.