Basic Information
Locus ID:
gene:TRIDC2AG080350
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Belongs to the TUB family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2A | 766177055 | 766180983 | + | gene:TRIDC2AG080350 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.33 | 52,096.32 Da | 60.42 | 67.73 | -0.53 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 58 | 111 | 2.3E-12 | IPR001810 |
| Pfam | PF01167 | Tub family | 122 | 466 | 3.7E-111 | IPR000007 |
| SUPERFAMILY | SSF54518 | Tubby C-terminal domain-like | 108 | 471 | 4.18E-97 | IPR025659 |
| SUPERFAMILY | SSF81383 | F-box domain | 58 | 103 | 6.28E-6 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 54 | 106 | 4.6E-7 | - |
| Gene3D | G3DSA:3.20.90.10 | Tubby Protein; Chain A | 118 | 465 | 4.0E-94 | IPR025659 |
| ProSitePatterns | PS01201 | Tub family signature 2. | 456 | 471 | - | IPR018066 |
| ProSitePatterns | PS01200 | Tub family signature 1. | 359 | 372 | - | IPR018066 |
| PRINTS | PR01573 | Tubby superfamily signature | 449 | 471 | 1.1E-57 | IPR000007 |
| PRINTS | PR01573 | Tubby superfamily signature | 428 | 447 | 1.1E-57 | IPR000007 |
| PRINTS | PR01573 | Tubby superfamily signature | 243 | 270 | 1.1E-57 | IPR000007 |
| PRINTS | PR01573 | Tubby superfamily signature | 191 | 215 | 1.1E-57 | IPR000007 |
| PRINTS | PR01573 | Tubby superfamily signature | 175 | 191 | 1.1E-57 | IPR000007 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 379 | 425 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 406 | 425 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 379 | 405 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G76900.1 | tubby like protein 1. Member of TLP family | 0 |
| RefSeq | XP_037480134.1 | tubby-like F-box protein 7 [Triticum dicoccoides] | 0 |
| Q7XSV4 | Tubby-like F-box protein 7 OS=Oryza sativa subsp. japonica OX=39947 GN=TULP7 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6B8S3 | Tubby-like F-box protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2AG080350.