Basic Information
Locus ID:
gene:TRIDC2AG079010
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Ubiquitin Carboxyl-terminal Hydrolase-like zinc finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2A | 759642814 | 759644661 | - | gene:TRIDC2AG079010 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 10.00 | 15,709.02 Da | 40.40 | 81.48 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 15 | 126 | 1.8E-14 | IPR001394 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 7 | 126 | 1.08E-22 | IPR038765 |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 1 | 134 | 1.7E-33 | - |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 15 | 135 | 15.598118 | IPR028889 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G22410.1 | Ubiquitin C-terminal hydrolases superfamily protein. | 0 |
| RefSeq | XP_044366585.1 | U4/U6.U5 tri-snRNP-associated protein 2-like [Triticum aestivum] | 0 |
| Q53GS9 | Ubiquitin carboxyl-terminal hydrolase 39 OS=Homo sapiens OX=9606 GN=USP39 PE=1 SV=2 | 0 | |
| TrEMBL | A0A453QD54 | U4/U6.U5 tri-snRNP-associated protein 2 OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2AG079010.