Basic Information
Locus ID:
gene:TRIDC2AG077380
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
WD40 repeats
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2A | 752320200 | 752326321 | - | gene:TRIDC2AG077380 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.02 | 90,691.56 Da | 54.34 | 66.63 | -0.58 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 349 | 382 | 1.3E-5 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 507 | 544 | 1.7E-4 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 467 | 502 | 1.3E-5 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 641 | 678 | 0.012 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 344 | 682 | 1.03E-56 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 457 | 719 | 9.0E-49 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 282 | 456 | 1.2E-11 | IPR015943 |
| SMART | SM00320 | WD40_4 | 464 | 502 | 7.1E-8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 505 | 544 | 4.9E-10 | IPR001680 |
| SMART | SM00320 | WD40_4 | 597 | 637 | 150.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 546 | 585 | 1.6 | IPR001680 |
| SMART | SM00320 | WD40_4 | 344 | 383 | 1.9E-7 | IPR001680 |
| SMART | SM00320 | WD40_4 | 638 | 679 | 0.0077 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 351 | 392 | 14.719144 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 511 | 545 | 12.480124 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 471 | 505 | 11.233774 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 511 | 545 | 10.390142 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 471 | 511 | 14.886235 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 351 | 388 | 11.787407 | - |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 370 | 384 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 489 | 503 | - | IPR019775 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 370 | 384 | 1.2E-6 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 531 | 545 | 1.2E-6 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 489 | 503 | 1.2E-6 | IPR020472 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 111 | 185 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 725 | 755 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 289 | 327 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 29 | 47 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 292 | 314 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 767 | 802 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 245 | 273 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 247 | 261 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 92 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 767 | 781 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 724 | 755 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 139 | 157 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 48 | 62 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 114 | 138 | - | - |
| Coils | Coil | Coil | 297 | 317 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G54200.1 | Transducin/WD40 repeat-like superfamily protein. | 0 |
| RefSeq | XP_037480007.1 | WD repeat-containing protein 44-like [Triticum dicoccoides] | 0 |
| Q9R037 | WD repeat-containing protein 44 OS=Rattus norvegicus OX=10116 GN=Wdr44 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6B9M0 | WD_REPEATS_REGION domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2AG077380.