Basic Information
Locus ID:
gene:TRIDC2AG077140
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
negative regulation of inclusion body assembly
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2A | 751322309 | 751341732 | - | gene:TRIDC2AG077140 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.60 | 531,126.88 Da | 46.36 | 94.59 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13920 | Zinc finger, C3HC4 type (RING finger) | 4706 | 4746 | 7.4E-10 | - |
| SUPERFAMILY | SSF55874 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 1400 | 1577 | 5.59E-13 | IPR036890 |
| SUPERFAMILY | SSF57850 | RING/U-box | 4706 | 4747 | 1.96E-8 | - |
| SUPERFAMILY | SSF55874 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 33 | 142 | 9.46E-14 | IPR036890 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 4683 | 4752 | 1.8E-14 | IPR013083 |
| Gene3D | G3DSA:3.30.565.10 | - | 23 | 174 | 6.9E-6 | IPR036890 |
| SMART | SM00184 | ring_2 | 4707 | 4740 | 7.5E-5 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 4707 | 4741 | 11.884405 | IPR001841 |
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G23110.1 | Zinc finger, C3HC4 type (RING finger) family protein. | 0 |
| RefSeq | XP_037479973.1 | sacsin-like isoform X1 [Triticum dicoccoides] | 0 |
| Q9JLC8 | Sacsin OS=Mus musculus OX=10090 GN=Sacs PE=1 SV=2 | 0 | |
| TrEMBL | A0A3B6B880 | RING-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2AG077140.