Basic Information
Locus ID:
gene:TRIDC2AG076270
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
PAN-like domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2A | 746827949 | 746830533 | - | gene:TRIDC2AG076270 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.79 | 87,974.73 Da | 42.47 | 80.71 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 514 | 781 | 1.11829E-87 | - |
| CDD | cd01098 | PAN_AP_plant | 355 | 442 | 4.34538E-19 | - |
| CDD | cd00028 | B_lectin | 50 | 168 | 2.05642E-26 | IPR001480 |
| Pfam | PF00954 | S-locus glycoprotein domain | 228 | 335 | 2.9E-22 | IPR000858 |
| Pfam | PF08276 | PAN-like domain | 371 | 429 | 7.2E-14 | IPR003609 |
| Pfam | PF01453 | D-mannose binding lectin | 88 | 194 | 1.6E-31 | IPR001480 |
| Pfam | PF00069 | Protein kinase domain | 511 | 778 | 1.4E-50 | IPR000719 |
| SUPERFAMILY | SSF51110 | alpha-D-mannose-specific plant lectins | 75 | 233 | 8.24E-26 | IPR036426 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 490 | 781 | 1.25E-77 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 477 | 582 | 6.2E-31 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 583 | 789 | 1.1E-59 | - |
| Gene3D | G3DSA:2.90.10.10 | - | 30 | 166 | 1.8E-21 | IPR036426 |
| SMART | SM00473 | ntp_6 | 370 | 441 | 0.0095 | IPR003609 |
| SMART | SM00220 | serkin_6 | 508 | 780 | 4.6E-32 | IPR000719 |
| SMART | SM00108 | blect_4 | 35 | 168 | 5.5E-32 | IPR001480 |
| PIRSF | PIRSF000641 | SRK | 5 | 807 | 5.1E-270 | IPR024171 |
| ProSiteProfiles | PS50927 | Bulb-type lectin domain profile. | 35 | 161 | 18.246199 | IPR001480 |
| ProSiteProfiles | PS50948 | PAN/Apple domain profile. | 359 | 442 | 9.85289 | IPR003609 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 508 | 783 | 37.021904 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 514 | 536 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 627 | 639 | - | IPR008271 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G19130.1 | S-locus lectin protein kinase family protein. | 0 |
| RefSeq | XP_048548407.1 | G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130 [Triticum urartu] | 0 |
| O64477 | G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130 OS=Arabidopsis thaliana OX=3702 GN=At2g19130 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8R7RA67 | Receptor-like serine/threonine-protein kinase OS=Triticum urartu OX=4572 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2AG076270.