HalophFGD

  • Home
  • Species
  • Search
  • Tools
    • Blast
    • GO enrichment
    • KEGG enrichment
    • Genome browser
    • Sequence extract
    • Network
    • Motif Enrichment
    • Motif Scan
    • Primer Design
  • Download
  • Manual
  • Contact
Basic Information
Locus ID: gene:TRIDC2AG075030
Species & Taxonomic ID: Triticum dicoccoides & 85692
Genome Assembly: GCF_002162155.2
Description: Serine threonine-protein kinase
Maps and Mapping Data
Chromosome Start End Strand ID
2A 743402759 743405958 + gene:TRIDC2AG075030
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
7.78 60,995.53 Da 36.67 79.14 -0.27
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
CDD cd00028 B_lectin 27 146 2.82527E-33 IPR001480
CDD cd01098 PAN_AP_plant 326 412 3.03008E-16 -
Pfam PF08276 PAN-like domain 329 398 3.7E-17 IPR003609
Pfam PF01453 D-mannose binding lectin 68 172 2.5E-30 IPR001480
Pfam PF00954 S-locus glycoprotein domain 204 313 2.8E-22 IPR000858
SUPERFAMILY SSF51110 alpha-D-mannose-specific plant lectins 56 210 2.36E-26 IPR036426
SUPERFAMILY SSF56112 Protein kinase-like (PK-like) 464 548 1.83E-14 IPR011009
Gene3D G3DSA:2.90.10.10 - 14 144 7.1E-24 IPR036426
Gene3D G3DSA:3.30.200.20 Phosphorylase Kinase; domain 1 453 548 1.4E-22 -
SMART SM00473 ntp_6 330 411 7.6E-6 IPR003609
SMART SM00108 blect_4 25 146 2.4E-36 IPR001480
ProSiteProfiles PS50948 PAN/Apple domain profile. 329 414 9.802374 IPR003609
ProSiteProfiles PS50927 Bulb-type lectin domain profile. 19 144 19.064598 IPR001480
ProSiteProfiles PS50011 Protein kinase domain profile. 495 548 11.227356 IPR000719
ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 501 523 - IPR017441
Gene Ontology
Biological Process:
GO:0006468 (protein phosphorylation) GO:0048544 (recognition of pollen)
Molecular Function:
GO:0004672 (protein kinase activity) GO:0005524 (ATP binding)
Best hit
Source Best Hit ID Description E-value
TAIR AT4G21380.2 - 0
RefSeq XP_044459581.1 G-type lectin S-receptor-like serine/threonine-protein kinase B120 [Triticum aestivum] 0
Swiss-Prot O81906 G-type lectin S-receptor-like serine/threonine-protein kinase B120 OS=Arabidopsis thaliana OX=3702 GN=B120 PE=2 SV=1 0
TrEMBL A0A3B6B840 Serine/threonine-protein kinase OS=Triticum aestivum OX=4565 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology

No orthogroup found for gene:TRIDC2AG075030.

Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.