Basic Information
Locus ID:
gene:TRIDC2AG072300
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Ring finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2A | 731834708 | 731840598 | - | gene:TRIDC2AG072300 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.13 | 72,746.39 Da | 50.12 | 66.98 | -0.59 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16481 | RING-H2_TTC3 | 621 | 663 | 1.61764E-19 | - |
| Pfam | PF13639 | Ring finger domain | 622 | 663 | 3.0E-10 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 621 | 666 | 4.62E-18 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 585 | 667 | 4.6E-17 | IPR013083 |
| SMART | SM00184 | ring_2 | 622 | 662 | 6.3E-7 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 622 | 663 | 12.208971 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 297 | 323 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 454 | 483 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 454 | 475 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G34040.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_037479732.1 | probable E3 ubiquitin-protein ligase HIP1 isoform X1 [Triticum dicoccoides] | 0 |
| Q7XTV7 | Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza sativa subsp. japonica OX=39947 GN=HIP1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A8R7VG92 | RING-type domain-containing protein OS=Triticum urartu OX=4572 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2AG072300.