Basic Information
Locus ID:
gene:TRIDC2AG071850
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2A | 728745180 | 728750186 | - | gene:TRIDC2AG071850 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.60 | 36,494.74 Da | 36.48 | 76.81 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00200 | WD40 | 7 | 314 | 1.74627E-50 | - |
| Pfam | PF00400 | WD domain, G-beta repeat | 189 | 219 | 0.039 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 43 | 80 | 6.0E-7 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 283 | 314 | 7.6E-6 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 7 | 37 | 0.24 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 149 | 174 | 0.048 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 5 | 314 | 8.7E-58 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 1 | 328 | 2.7E-106 | IPR015943 |
| SMART | SM00320 | WD40_4 | 1 | 38 | 6.5 | IPR001680 |
| SMART | SM00320 | WD40_4 | 177 | 219 | 2.8E-4 | IPR001680 |
| SMART | SM00320 | WD40_4 | 41 | 80 | 2.9E-9 | IPR001680 |
| SMART | SM00320 | WD40_4 | 135 | 174 | 8.8E-5 | IPR001680 |
| SMART | SM00320 | WD40_4 | 277 | 316 | 1.3E-4 | IPR001680 |
| SMART | SM00320 | WD40_4 | 222 | 262 | 27.0 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 187 | 222 | 9.572873 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 142 | 183 | 12.780889 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 284 | 314 | 10.942887 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 142 | 179 | 9.704691 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 48 | 85 | 11.101955 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 6 | 47 | 10.909469 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 284 | 314 | 9.177421 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 187 | 228 | 12.313033 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 6 | 37 | 8.544697 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 48 | 89 | 14.652308 | IPR001680 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 161 | 175 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 67 | 81 | - | IPR019775 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 161 | 175 | 1.6E-7 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 206 | 220 | 1.6E-7 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 67 | 81 | 1.6E-7 | IPR020472 |
| Hamap | MF_03008 | Eukaryotic translation initiation factor 3 subunit I [EIF3I]. | 1 | 326 | 72.777412 | IPR027525 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G46290.1 | Transducin/WD40 repeat-like superfamily protein. | 0 |
| RefSeq | XP_037479712.1 | eukaryotic translation initiation factor 3 subunit I-like [Triticum dicoccoides] | 0 |
| Q38884 | Eukaryotic translation initiation factor 3 subunit I OS=Arabidopsis thaliana OX=3702 GN=TIF3I1 PE=2 SV=2 | 0 | |
| TrEMBL | A0A8R7TNC7 | Eukaryotic translation initiation factor 3 subunit I OS=Triticum urartu OX=4572 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2AG071850.