Basic Information
Locus ID:
gene:TRIDC2AG071620
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Wall-associated receptor kinase galacturonan-binding
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2A | 728093546 | 728096441 | - | gene:TRIDC2AG071620 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.89 | 81,931.32 Da | 36.30 | 91.46 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00054 | EGF_CA | 310 | 336 | 7.22655E-6 | - |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 38 | 95 | 6.3E-12 | IPR025287 |
| Pfam | PF00069 | Protein kinase domain | 425 | 688 | 1.0E-44 | IPR000719 |
| SUPERFAMILY | SSF57196 | EGF/Laminin | 309 | 336 | 1.3E-5 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 407 | 692 | 1.89E-74 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 387 | 498 | 5.6E-31 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 499 | 715 | 7.6E-53 | - |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 282 | 343 | 2.2E-9 | - |
| SMART | SM00220 | serkin_6 | 423 | 691 | 1.2E-31 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 423 | 699 | 35.283424 | IPR000719 |
| ProSitePatterns | PS01187 | Calcium-binding EGF-like domain signature. | 310 | 335 | - | IPR018097 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 429 | 452 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 543 | 555 | - | IPR008271 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G16130.1 | wall associated kinase-like 2. wall-associated kinase like | 0 |
| RefSeq | XP_037474787.1 | putative wall-associated receptor kinase-like 11 [Triticum dicoccoides] | 0 |
| Q7X8C5 | Wall-associated receptor kinase-like 2 OS=Arabidopsis thaliana OX=3702 GN=WAKL2 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8R7TP29 | Protein kinase domain-containing protein OS=Triticum urartu OX=4572 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2AG071620.