Basic Information
Locus ID:
gene:TRIDC2AG071590
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Wall-associated receptor kinase galacturonan-binding
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2A | 728036716 | 728042430 | - | gene:TRIDC2AG071590 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.81 | 78,921.67 Da | 37.76 | 88.48 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00054 | EGF_CA | 338 | 364 | 2.98556E-6 | - |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 40 | 98 | 1.4E-11 | IPR025287 |
| Pfam | PF00069 | Protein kinase domain | 396 | 659 | 1.3E-45 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 375 | 663 | 1.89E-75 | IPR011009 |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 299 | 373 | 1.5E-10 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 374 | 469 | 7.1E-30 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 470 | 690 | 3.3E-54 | - |
| SMART | SM00179 | egfca_6 | 338 | 377 | 0.0075 | IPR001881 |
| SMART | SM00220 | serkin_6 | 394 | 661 | 8.0E-35 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 394 | 663 | 36.060795 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 400 | 423 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 514 | 526 | - | IPR008271 |
| ProSitePatterns | PS01187 | Calcium-binding EGF-like domain signature. | 338 | 363 | - | IPR018097 |
| Coils | Coil | Coil | 656 | 676 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21210.1 | wall associated kinase 4. cell wall-associated ser/thr kinase involved in cell elongation and lateral root development | 0 |
| RefSeq | XP_037479694.1 | wall-associated receptor kinase 4-like [Triticum dicoccoides] | 0 |
| Q9LMN6 | Wall-associated receptor kinase 4 OS=Arabidopsis thaliana OX=3702 GN=WAK4 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8I6X1C5 | Protein kinase domain-containing protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2AG071590.