Basic Information
Locus ID:
gene:TRIDC2AG071040
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
S-locus glycoprotein domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2A | 726547314 | 726549815 | - | gene:TRIDC2AG071040 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.89 | 91,815.39 Da | 41.77 | 81.51 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00053 | EGF | 301 | 329 | 0.00129562 | - |
| CDD | cd01098 | PAN_AP_plant | 345 | 424 | 6.21441E-19 | - |
| CDD | cd00028 | B_lectin | 54 | 162 | 5.37948E-27 | IPR001480 |
| Pfam | PF00954 | S-locus glycoprotein domain | 261 | 331 | 2.5E-10 | IPR000858 |
| Pfam | PF01453 | D-mannose binding lectin | 88 | 174 | 6.3E-23 | IPR001480 |
| Pfam | PF00069 | Protein kinase domain | 527 | 807 | 4.9E-43 | IPR000719 |
| Pfam | PF08276 | PAN-like domain | 372 | 402 | 6.5E-6 | IPR003609 |
| SUPERFAMILY | SSF51110 | alpha-D-mannose-specific plant lectins | 75 | 218 | 1.27E-28 | IPR036426 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 505 | 809 | 1.12E-62 | IPR011009 |
| Gene3D | G3DSA:2.90.10.10 | - | 39 | 161 | 1.3E-21 | IPR036426 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 600 | 817 | 2.6E-50 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 494 | 599 | 3.5E-25 | - |
| SMART | SM00220 | serkin_6 | 525 | 816 | 1.5E-16 | IPR000719 |
| SMART | SM00108 | blect_4 | 47 | 162 | 6.0E-28 | IPR001480 |
| PIRSF | PIRSF000641 | SRK | 26 | 826 | 7.8E-200 | IPR024171 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 525 | 816 | 33.290531 | IPR000719 |
| ProSiteProfiles | PS50927 | Bulb-type lectin domain profile. | 41 | 160 | 18.131111 | IPR001480 |
| ProSiteProfiles | PS50948 | PAN/Apple domain profile. | 349 | 424 | 8.246512 | IPR003609 |
| ProSiteProfiles | PS50026 | EGF-like domain profile. | 297 | 335 | 8.746229 | IPR000742 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 647 | 659 | - | IPR008271 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G19130.1 | S-locus lectin protein kinase family protein. | 0 |
| RefSeq | XP_037480795.1 | putative receptor protein kinase ZmPK1 [Triticum dicoccoides] | 0 |
| P17801 | Putative receptor protein kinase ZmPK1 OS=Zea mays OX=4577 GN=PK1 PE=2 SV=2 | 0 | |
| TrEMBL | A0A453D6L7 | Receptor-like serine/threonine-protein kinase OS=Aegilops tauschii subsp. strangulata OX=200361 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2AG071040.