Basic Information
Locus ID:
gene:TRIDC2AG068590
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2A | 714350402 | 714354869 | - | gene:TRIDC2AG068590 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.44 | 72,788.20 Da | 41.91 | 89.06 | -0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00028 | B_lectin | 38 | 152 | 2.37855E-32 | IPR001480 |
| CDD | cd01098 | PAN_AP_plant | 340 | 430 | 2.44272E-29 | - |
| Pfam | PF08276 | PAN-like domain | 348 | 416 | 1.9E-23 | IPR003609 |
| Pfam | PF00069 | Protein kinase domain | 501 | 656 | 2.7E-29 | IPR000719 |
| Pfam | PF00954 | S-locus glycoprotein domain | 211 | 322 | 1.5E-25 | IPR000858 |
| Pfam | PF01453 | D-mannose binding lectin | 77 | 178 | 1.0E-32 | IPR001480 |
| SUPERFAMILY | SSF51110 | alpha-D-mannose-specific plant lectins | 77 | 183 | 2.88E-27 | IPR036426 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 476 | 658 | 2.6E-49 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 466 | 577 | 1.7E-32 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 578 | 668 | 6.8E-23 | - |
| Gene3D | G3DSA:2.90.10.10 | - | 23 | 150 | 3.5E-22 | IPR036426 |
| SMART | SM00108 | blect_4 | 35 | 152 | 1.2E-32 | IPR001480 |
| SMART | SM00220 | serkin_6 | 500 | 665 | 1.7E-7 | IPR000719 |
| SMART | SM00473 | ntp_6 | 349 | 429 | 3.6E-13 | IPR003609 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 500 | 668 | 28.34363 | IPR000719 |
| ProSiteProfiles | PS50927 | Bulb-type lectin domain profile. | 29 | 149 | 18.374073 | IPR001480 |
| ProSiteProfiles | PS50948 | PAN/Apple domain profile. | 344 | 430 | 10.580305 | IPR003609 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 624 | 636 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 506 | 528 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G21380.1 | receptor kinase 3. encodes a putative receptor-like serine/threonine protein kinases that is similar to Brassica self-incompatibility (S) locus. Expressed in root. Shoot expression limited to limited to the root-hypocotyl transition zone and at the base of lateral roots as well as in axillary buds, and pedicels. | 0 |
| RefSeq | XP_037479537.1 | receptor-like serine/threonine-protein kinase SD1-8 [Triticum dicoccoides] | 0 |
| O81905 | Receptor-like serine/threonine-protein kinase SD1-8 OS=Arabidopsis thaliana OX=3702 GN=SD18 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6B6E3 | Receptor-like serine/threonine-protein kinase OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2AG068590.