Basic Information
Locus ID:
gene:TRIDC2AG068560
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2A | 714312913 | 714320989 | - | gene:TRIDC2AG068560 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.24 | 90,729.54 Da | 38.07 | 85.13 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01098 | PAN_AP_plant | 343 | 432 | 2.67398E-23 | - |
| CDD | cd00028 | B_lectin | 41 | 155 | 1.39087E-30 | IPR001480 |
| Pfam | PF00954 | S-locus glycoprotein domain | 213 | 324 | 2.3E-27 | IPR000858 |
| Pfam | PF08276 | PAN-like domain | 351 | 418 | 7.1E-23 | IPR003609 |
| Pfam | PF01453 | D-mannose binding lectin | 80 | 180 | 6.5E-33 | IPR001480 |
| Pfam | PF00069 | Protein kinase domain | 528 | 788 | 5.2E-45 | IPR000719 |
| SUPERFAMILY | SSF51110 | alpha-D-mannose-specific plant lectins | 80 | 186 | 6.54E-29 | IPR036426 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 519 | 798 | 1.24E-69 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 493 | 604 | 8.0E-25 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 605 | 801 | 7.2E-50 | - |
| Gene3D | G3DSA:2.90.10.10 | - | 26 | 153 | 2.8E-22 | IPR036426 |
| SMART | SM00220 | serkin_6 | 527 | 791 | 3.1E-33 | IPR000719 |
| SMART | SM00473 | ntp_6 | 351 | 431 | 1.0E-9 | IPR003609 |
| SMART | SM00108 | blect_4 | 38 | 155 | 2.3E-29 | IPR001480 |
| PIRSF | PIRSF000641 | SRK | 3 | 826 | 2.4E-211 | IPR024171 |
| ProSiteProfiles | PS50948 | PAN/Apple domain profile. | 346 | 432 | 10.499481 | IPR003609 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 527 | 800 | 35.071415 | IPR000719 |
| ProSiteProfiles | PS50927 | Bulb-type lectin domain profile. | 32 | 151 | 18.617035 | IPR001480 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 533 | 555 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 649 | 661 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 806 | 828 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G21380.1 | receptor kinase 3. encodes a putative receptor-like serine/threonine protein kinases that is similar to Brassica self-incompatibility (S) locus. Expressed in root. Shoot expression limited to limited to the root-hypocotyl transition zone and at the base of lateral roots as well as in axillary buds, and pedicels. | 0 |
| RefSeq | XP_037479535.1 | S-locus-specific glycoprotein S13-like isoform X1 [Triticum dicoccoides] | 0 |
| O81905 | Receptor-like serine/threonine-protein kinase SD1-8 OS=Arabidopsis thaliana OX=3702 GN=SD18 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6B738 | Receptor-like serine/threonine-protein kinase OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2AG068560.