Basic Information
Locus ID:
gene:TRIDC2AG067140
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Leucine rich repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2A | 708949634 | 708951048 | + | gene:TRIDC2AG067140 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.79 | 45,563.98 Da | 36.04 | 103.88 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 285 | 416 | 7.0E-16 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 120 | 177 | 1.3E-9 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 71 | 191 | 2.95E-27 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 257 | 416 | 2.08E-31 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 261 | 362 | 5.7E-18 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 363 | 417 | 1.2E-10 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 66 | 218 | 5.3E-38 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 281 | 418 | 17.03643 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 287 | 310 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G47570.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_037479441.1 | receptor kinase-like protein Xa21 [Triticum dicoccoides] | 0 |
| Q1MX30 | Receptor kinase-like protein Xa21 OS=Oryza sativa subsp. indica OX=39946 GN=XA21 PE=1 SV=1 | 0 | |
| TrEMBL | F2DP64 | Predicted protein (Fragment) OS=Hordeum vulgare subsp. vulgare OX=112509 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2AG067140.