Basic Information
Locus ID:
gene:TRIDC2AG065800
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
A Receptor for Ubiquitination Targets
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2A | 701906825 | 701909768 | - | gene:TRIDC2AG065800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.27 | 61,768.45 Da | 39.60 | 78.71 | -0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 474 | 489 | 0.19 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 172 | 206 | 0.0076 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 269 | 300 | 2.7E-5 | IPR001680 |
| Pfam | PF00646 | F-box domain | 80 | 126 | 1.8E-5 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 70 | 158 | 2.35E-13 | IPR036047 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 171 | 492 | 3.97E-49 | IPR036322 |
| Gene3D | G3DSA:1.20.1280.50 | - | 70 | 161 | 9.0E-8 | - |
| Gene3D | G3DSA:2.130.10.10 | - | 312 | 532 | 4.0E-24 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 162 | 311 | 4.6E-20 | IPR015943 |
| SMART | SM00320 | WD40_4 | 263 | 300 | 1.7E-6 | IPR001680 |
| SMART | SM00320 | WD40_4 | 452 | 489 | 2.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 167 | 206 | 0.0024 | IPR001680 |
| SMART | SM00320 | WD40_4 | 303 | 338 | 1.6 | IPR001680 |
| SMART | SM00320 | WD40_4 | 341 | 381 | 0.39 | IPR001680 |
| SMART | SM00320 | WD40_4 | 390 | 427 | 0.078 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 270 | 300 | 9.414692 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 476 | 498 | 8.703868 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 174 | 215 | 13.382416 | IPR001680 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 79 | 125 | 10.027357 | IPR001810 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 174 | 210 | 10.785595 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 270 | 309 | 11.510997 | IPR001680 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 193 | 207 | - | IPR019775 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 193 | 207 | 1.1E-5 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 287 | 301 | 1.1E-5 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 476 | 490 | 1.1E-5 | IPR020472 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 50 | 69 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G21040.1 | F-box protein 2. Encodes an F-box containing protein that interacts physically with BHLH32 and appears to be involved in mediating phosphate starvation responses. | 0 |
| RefSeq | XP_037479351.1 | F-box/WD-40 repeat-containing protein At5g21040-like [Triticum dicoccoides] | 0 |
| Q94AD8 | F-box/WD-40 repeat-containing protein At5g21040 OS=Arabidopsis thaliana OX=3702 GN=At5g21040 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6B514 | F-box domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2AG065800.