Basic Information
Locus ID:
gene:TRIDC2AG065120
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Modified RING finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2A | 697600246 | 697603836 | - | gene:TRIDC2AG065120 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.95 | 96,630.95 Da | 49.09 | 84.24 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16664 | RING-Ubox_PUB | 491 | 533 | 2.91118E-17 | - |
| Pfam | PF04564 | U-box domain | 487 | 558 | 2.1E-9 | IPR003613 |
| SUPERFAMILY | SSF57850 | RING/U-box | 483 | 559 | 3.81E-17 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 487 | 561 | 4.3E-19 | IPR013083 |
| SMART | SM00504 | Ubox_2 | 490 | 554 | 2.1E-20 | IPR003613 |
| ProSiteProfiles | PS51698 | U-box domain profile. | 486 | 561 | 29.024508 | IPR003613 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 23 | 41 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 375 | 424 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 96 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 321 | 344 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G68940.3 | Armadillo/beta-catenin-like repeat family protein. | 0 |
| RefSeq | XP_037479301.1 | uncharacterized protein LOC119356449 isoform X3 [Triticum dicoccoides] | 0 |
| D1FP53 | Putative E3 ubiquitin-protein ligase LIN OS=Medicago truncatula OX=3880 GN=LIN PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6B5G3 | RING-type E3 ubiquitin transferase OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2AG065120.