Basic Information
Locus ID:
gene:TRIDC2AG058740
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
EF-hand domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2A | 656418396 | 656421142 | + | gene:TRIDC2AG058740 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.10 | 60,089.06 Da | 44.99 | 78.53 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 99 | 356 | 5.74816E-138 | - |
| Pfam | PF00069 | Protein kinase domain | 99 | 357 | 6.3E-74 | IPR000719 |
| Pfam | PF13499 | EF-hand domain pair | 473 | 536 | 7.0E-14 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 404 | 464 | 4.3E-14 | IPR002048 |
| SUPERFAMILY | SSF47473 | EF-hand | 395 | 536 | 9.81E-48 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 99 | 373 | 4.59E-83 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 101 | 184 | 1.8E-26 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 364 | 538 | 6.1E-61 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 185 | 363 | 2.5E-58 | - |
| SMART | SM00054 | efh_1 | 403 | 431 | 3.3E-5 | IPR002048 |
| SMART | SM00220 | serkin_6 | 99 | 357 | 7.7E-99 | IPR000719 |
| SMART | SM00054 | efh_1 | 475 | 503 | 5.0E-6 | IPR002048 |
| SMART | SM00054 | efh_1 | 510 | 538 | 6.4E-5 | IPR002048 |
| SMART | SM00054 | efh_1 | 439 | 467 | 6.5E-5 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 399 | 434 | 15.210791 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 435 | 470 | 12.281773 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 507 | 539 | 13.397589 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 99 | 357 | 48.569382 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 471 | 506 | 16.856619 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 484 | 496 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 519 | 531 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 412 | 424 | - | IPR018247 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 105 | 128 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 219 | 231 | - | IPR008271 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 448 | 460 | - | IPR018247 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 23 | 64 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 64 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G76040.2 | calcium-dependent protein kinase 29. member of Calcium Dependent Protein Kinase | 0 |
| RefSeq | XP_037478882.1 | calcium-dependent protein kinase 12-like [Triticum dicoccoides] | 0 |
| Q7XSQ5 | Calcium-dependent protein kinase 12 OS=Oryza sativa subsp. japonica OX=39947 GN=CPK12 PE=2 SV=2 | 0 | |
| TrEMBL | A0A3B6B3V2 | Calcium-dependent protein kinase 29 OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2AG058740.