Basic Information
Locus ID:
gene:TRIDC2AG057190
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Short Name:
BRH1
Description:
Anaphase-promoting complex subunit 11 RING-H2 finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2A | 642548774 | 642549412 | + | gene:TRIDC2AG057190 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.13 | 22,190.29 Da | 51.49 | 102.02 | 0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16448 | RING-H2 | 104 | 147 | 3.7404E-14 | - |
| Pfam | PF13639 | Ring finger domain | 103 | 147 | 7.6E-13 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 103 | 153 | 6.13E-19 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 65 | 152 | 3.1E-18 | IPR013083 |
| SMART | SM00184 | ring_2 | 104 | 146 | 4.3E-7 | IPR001841 |
| SMART | SM00744 | ringv_2 | 103 | 147 | 0.0044 | IPR011016 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 104 | 147 | 12.267982 | IPR001841 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G61460.1 | brassinosteroid-responsive RING-H2. Encodes a novel ring finger protein and forms an N-terminal hydrophobic domain and a C-terminal RING-H2 signature. Expression is down regulated by brassinolide. | 0 |
| RefSeq | XP_037478776.1 | E3 ubiquitin-protein ligase RHA1B-like [Triticum dicoccoides] | 0 |
| Q9XF92 | Brassinosteroid-responsive RING protein 1 OS=Arabidopsis thaliana OX=3702 GN=BRH1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6CD08 | RING-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2AG057190.