Basic Information
Locus ID:
gene:TRIDC2AG056450
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
ICP0-binding domain of Ubiquitin-specific protease 7
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2A | 634427624 | 634438022 | + | gene:TRIDC2AG056450 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.56 | 79,941.67 Da | 50.52 | 91.07 | -0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16655 | RING-Ubox_WDSUB1_like | 639 | 680 | 2.60618E-21 | - |
| Pfam | PF12436 | ICP0-binding domain of Ubiquitin-specific protease 7 | 108 | 284 | 3.4E-41 | IPR024729 |
| Pfam | PF00069 | Protein kinase domain | 361 | 601 | 6.0E-27 | IPR000719 |
| Pfam | PF04564 | U-box domain | 636 | 706 | 1.3E-13 | IPR003613 |
| SUPERFAMILY | SSF57850 | RING/U-box | 633 | 706 | 9.71E-22 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 341 | 603 | 5.33E-51 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 337 | 426 | 6.1E-16 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 427 | 612 | 1.2E-34 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 634 | 708 | 1.1E-23 | IPR013083 |
| Gene3D | G3DSA:3.10.20.90 | - | 168 | 282 | 4.7E-36 | - |
| SMART | SM00504 | Ubox_2 | 638 | 701 | 2.2E-20 | IPR003613 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 359 | 615 | 24.301306 | IPR000719 |
| ProSiteProfiles | PS51698 | U-box domain profile. | 634 | 708 | 31.297853 | IPR003613 |
| Coils | Coil | Coil | 287 | 339 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G45910.1 | U-box domain-containing protein kinase family protein. | 0 |
| RefSeq | XP_037480658.1 | U-box domain-containing protein 57-like [Triticum dicoccoides] | 0 |
| Q0DR28 | U-box domain-containing protein 57 OS=Oryza sativa subsp. japonica OX=39947 GN=PUB57 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6B3W4 | Serine/threonine-protein kinase OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2AG056450.