Basic Information
Locus ID:
gene:TRIDC2AG055500
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
RING-H2 zinc finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2A | 624803920 | 624809553 | + | gene:TRIDC2AG055500 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.75 | 80,017.24 Da | 50.89 | 69.72 | -0.58 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16454 | RING-H2_PA-TM-RING | 676 | 717 | 1.18434E-17 | - |
| Pfam | PF13639 | Ring finger domain | 676 | 717 | 3.1E-11 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 667 | 722 | 2.83E-15 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 642 | 720 | 6.1E-19 | IPR013083 |
| SMART | SM00184 | ring_2 | 676 | 716 | 1.5E-8 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 676 | 717 | 12.430266 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 395 | 427 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 90 | 119 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 395 | 466 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 97 | 119 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G04790.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_037478669.1 | uncharacterized protein LOC119355889 [Triticum dicoccoides] | 0 |
| Q9M2S6 | E3 ubiquitin-protein ligase SDIR1 OS=Arabidopsis thaliana OX=3702 GN=SDIR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6B1R8 | RING-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2AG055500.