Basic Information
Locus ID:
gene:TRIDC2AG054030
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
WD domain, G-beta repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2A | 609401296 | 609406618 | - | gene:TRIDC2AG054030 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.72 | 78,620.16 Da | 63.80 | 62.95 | -0.66 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 395 | 431 | 1.1E-7 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 436 | 473 | 8.2E-4 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 291 | 322 | 1.1E-6 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 289 | 576 | 3.97E-49 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 390 | 587 | 1.4E-39 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 268 | 361 | 1.3E-10 | IPR015943 |
| SMART | SM00320 | WD40_4 | 393 | 431 | 1.6E-10 | IPR001680 |
| SMART | SM00320 | WD40_4 | 516 | 554 | 7.4 | IPR001680 |
| SMART | SM00320 | WD40_4 | 476 | 514 | 1.9 | IPR001680 |
| SMART | SM00320 | WD40_4 | 434 | 473 | 5.6E-9 | IPR001680 |
| SMART | SM00320 | WD40_4 | 284 | 323 | 1.2E-7 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 440 | 474 | 11.377324 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 291 | 324 | 11.339228 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 400 | 434 | 10.759232 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 291 | 324 | 13.68318 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 400 | 440 | 13.85027 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 440 | 474 | 9.520146 | - |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 418 | 432 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 310 | 324 | - | IPR019775 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 310 | 324 | 1.6E-5 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 418 | 432 | 1.6E-5 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 460 | 474 | 1.6E-5 | IPR020472 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 129 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 21 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 627 | 688 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 225 | 267 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 629 | 653 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 661 | 680 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 230 | 251 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 187 | 210 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 187 | 206 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G54200.1 | Transducin/WD40 repeat-like superfamily protein. | 0 |
| RefSeq | XP_037478559.1 | WD repeat-containing protein 44-like isoform X2 [Triticum dicoccoides] | 0 |
| Q498F0 | WD repeat-containing protein 44 OS=Xenopus laevis OX=8355 GN=wdr44 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6B381 | WD_REPEATS_REGION domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2AG054030.