Basic Information
Locus ID:
gene:TRIDC2AG053920
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
RING-type zinc-finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2A | 608988119 | 608991655 | + | gene:TRIDC2AG053920 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.93 | 28,710.57 Da | 55.13 | 74.56 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16745 | RING-HC_AtRMA_like | 44 | 98 | 6.21586E-25 | - |
| Pfam | PF00097 | Zinc finger, C3HC4 type (RING finger) | 46 | 96 | 3.8E-9 | IPR018957 |
| SUPERFAMILY | SSF57850 | RING/U-box | 43 | 109 | 3.53E-17 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 32 | 110 | 1.1E-16 | IPR013083 |
| SMART | SM00184 | ring_2 | 46 | 96 | 1.5E-10 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 46 | 97 | 12.563043 | IPR001841 |
| ProSitePatterns | PS00518 | Zinc finger RING-type signature. | 61 | 70 | - | IPR017907 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G27470.1 | RING membrane-anchor 3. Encodes a RING finger E3 ubiquitin ligase. | 0 |
| RefSeq | XP_037478543.1 | E3 ubiquitin-protein ligase RMA1H1-like [Triticum dicoccoides] | 0 |
| Q6R567 | E3 ubiquitin-protein ligase RMA1H1 OS=Capsicum annuum OX=4072 GN=RMA1H1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8R7TKP0 | RING-type E3 ubiquitin transferase OS=Triticum urartu OX=4572 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2AG053920.