Basic Information
Locus ID:
gene:TRIDC2AG053330
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Leucine rich repeat N-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2A | 605628424 | 605633256 | - | gene:TRIDC2AG053330 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.81 | 74,978.30 Da | 37.81 | 94.81 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 72 | 112 | 1.1E-9 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 402 | 670 | 3.4E-12 | IPR001245 |
| Pfam | PF00560 | Leucine Rich Repeat | 213 | 231 | 1.0 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 141 | 200 | 7.0E-7 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 386 | 671 | 5.05E-31 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 71 | 274 | 9.45E-44 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 373 | 480 | 1.4E-14 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 187 | 284 | 1.2E-19 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 73 | 186 | 1.8E-34 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 482 | 685 | 3.2E-25 | - |
| SMART | SM00369 | LRR_typ_2 | 250 | 274 | 130.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 139 | 162 | 84.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 211 | 234 | 42.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 163 | 187 | 16.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 399 | 677 | 14.91633 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G63430.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_037478494.1 | probable LRR receptor-like serine/threonine-protein kinase At1g63430 [Triticum dicoccoides] | 0 |
| C0LGH8 | Probable LRR receptor-like serine/threonine-protein kinase At1g63430 OS=Arabidopsis thaliana OX=3702 GN=At1g63430 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6B154 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2AG053330.