Basic Information
Locus ID:
gene:TRIDC2AG052560
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
WD40 repeats
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2A | 601609673 | 601615809 | + | gene:TRIDC2AG052560 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.98 | 34,240.08 Da | 40.34 | 79.41 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 21 | 301 | 2.4E-33 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 61 | 306 | 4.3E-32 | IPR015943 |
| SMART | SM00320 | WD40_4 | 249 | 297 | 35.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 71 | 108 | 480.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 20 | 57 | 140.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 113 | 153 | 0.039 | IPR001680 |
| SMART | SM00320 | WD40_4 | 159 | 199 | 0.0019 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 166 | 202 | 10.374778 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 166 | 202 | 8.729241 | - |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 186 | 200 | - | IPR019775 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G63010.1 | Transducin/WD40 repeat-like superfamily protein. | 0 |
| RefSeq | XP_037478438.1 | diphthine methyltransferase-like [Triticum dicoccoides] | 0 |
| Q55C80 | Diphthine methyltransferase homolog OS=Dictyostelium discoideum OX=44689 GN=wdr85 PE=3 SV=1 | 0 | |
| TrEMBL | A0A3B6B0Z3 | WD_REPEATS_REGION domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2AG052560.