Basic Information
Locus ID:
gene:TRIDC2AG049400
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
WD domain, G-beta repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2A | 571991149 | 571992859 | - | gene:TRIDC2AG049400 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.73 | 45,920.12 Da | 39.76 | 85.06 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00200 | WD40 | 124 | 436 | 1.88495E-40 | - |
| Pfam | PF00400 | WD domain, G-beta repeat | 236 | 271 | 1.3E-5 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 295 | 327 | 0.22 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 201 | 230 | 0.0042 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 341 | 372 | 0.013 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 124 | 156 | 0.17 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 109 | 437 | 1.32E-46 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 289 | 442 | 8.1E-24 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 9 | 288 | 2.1E-26 | IPR015943 |
| SMART | SM00320 | WD40_4 | 380 | 436 | 0.48 | IPR001680 |
| SMART | SM00320 | WD40_4 | 234 | 272 | 1.9E-8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 114 | 157 | 2.1 | IPR001680 |
| SMART | SM00320 | WD40_4 | 192 | 231 | 9.2E-4 | IPR001680 |
| SMART | SM00320 | WD40_4 | 335 | 373 | 0.0012 | IPR001680 |
| SMART | SM00320 | WD40_4 | 289 | 328 | 5.7E-4 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 296 | 337 | 10.608706 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 199 | 240 | 11.510997 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 241 | 271 | 9.836508 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 241 | 271 | 11.778342 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 199 | 230 | 8.992876 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 296 | 328 | 8.834696 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 342 | 372 | 9.940341 | IPR001680 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G24530.1 | Transducin/WD40 repeat-like superfamily protein. | 0 |
| RefSeq | XP_037478207.1 | protein JINGUBANG-like [Triticum dicoccoides] | 0 |
| O48716 | Protein JINGUBANG OS=Arabidopsis thaliana OX=3702 GN=JGB PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6B0L4 | WD_REPEATS_REGION domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2AG049400.