Basic Information
Locus ID:
gene:TRIDC2AG047860
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
RING/Ubox like zinc-binding domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2A | 556383244 | 556385304 | - | gene:TRIDC2AG047860 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.50 | 36,264.72 Da | 72.95 | 53.03 | -0.66 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16618 | mRING-HC-C4C4_CNOT4 | 277 | 320 | 2.15669E-18 | IPR039515 |
| Pfam | PF14570 | RING/Ubox like zinc-binding domain | 277 | 323 | 3.1E-17 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 271 | 325 | 1.03E-13 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 269 | 333 | 8.5E-17 | IPR013083 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 277 | 319 | 9.922256 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 81 | 105 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 117 | 157 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 194 | 225 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 194 | 230 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 28 | 45 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 177 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G48070.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_037478103.1 | uncharacterized protein LOC119355403 [Triticum dicoccoides] | 0 |
| TrEMBL | A0A3B6B032 | RING-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2AG047860.