Basic Information
Locus ID:
gene:TRIDC2AG046730
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Belongs to the peptidase C19 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2A | 545499052 | 545503956 | - | gene:TRIDC2AG046730 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.39 | 47,607.34 Da | 50.58 | 72.41 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02663 | Peptidase_C19G | 70 | 406 | 0.0 | - |
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 69 | 405 | 4.4E-63 | IPR001394 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 67 | 406 | 4.71E-92 | IPR038765 |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 50 | 407 | 2.2E-107 | - |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 69 | 408 | 62.090668 | IPR028889 |
| ProSitePatterns | PS00973 | Ubiquitin specific protease (USP) domain signature 2. | 339 | 357 | - | IPR018200 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 70 | 85 | - | IPR018200 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G22310.1 | ubiquitin-specific protease 4. Encodes a ubiquitin-specific protease. | 0 |
| RefSeq | XP_037478015.1 | ubiquitin carboxyl-terminal hydrolase 4-like [Triticum dicoccoides] | 0 |
| Q8LAM0 | Ubiquitin carboxyl-terminal hydrolase 4 OS=Arabidopsis thaliana OX=3702 GN=UBP4 PE=1 SV=2 | 0 | |
| TrEMBL | A0A453C3L9 | Ubiquitin carboxyl-terminal hydrolase OS=Aegilops tauschii subsp. strangulata OX=200361 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2AG046730.