Basic Information
Locus ID:
gene:TRIDC2AG044540
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Modified RING finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2A | 523517272 | 523519466 | + | gene:TRIDC2AG044540 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.86 | 42,030.21 Da | 49.14 | 102.70 | 0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16664 | RING-Ubox_PUB | 7 | 49 | 3.89973E-26 | - |
| Pfam | PF04564 | U-box domain | 3 | 75 | 6.4E-17 | IPR003613 |
| SUPERFAMILY | SSF57850 | RING/U-box | 2 | 74 | 1.32E-24 | - |
| SUPERFAMILY | SSF48371 | ARM repeat | 92 | 382 | 2.35E-9 | IPR016024 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 2 | 78 | 9.0E-27 | IPR013083 |
| Gene3D | G3DSA:1.25.10.10 | - | 185 | 400 | 9.0E-11 | IPR011989 |
| SMART | SM00504 | Ubox_2 | 6 | 72 | 4.7E-29 | IPR003613 |
| ProSiteProfiles | PS51698 | U-box domain profile. | 2 | 79 | 28.29916 | IPR003613 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G49780.1 | plant U-box 26. | 0 |
| RefSeq | XP_037481582.1 | U-box domain-containing protein 26-like [Triticum dicoccoides] | 0 |
| Q9FXA4 | U-box domain-containing protein 26 OS=Arabidopsis thaliana OX=3702 GN=PUB26 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6C7L4 | RING-type E3 ubiquitin transferase OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2AG044540.