Basic Information
Locus ID:
gene:TRIDC2AG043850
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Belongs to the peptidase C19 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2A | 513700040 | 513704536 | + | gene:TRIDC2AG043850 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.28 | 59,389.44 Da | 51.53 | 84.18 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02662 | Peptidase_C19F | 66 | 534 | 6.73239E-53 | - |
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 66 | 533 | 2.6E-38 | IPR001394 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 66 | 535 | 9.25E-69 | IPR038765 |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 63 | 536 | 1.2E-70 | - |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 65 | 536 | 38.70134 | IPR028889 |
| ProSitePatterns | PS00973 | Ubiquitin specific protease (USP) domain signature 2. | 467 | 484 | - | IPR018200 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 66 | 81 | - | IPR018200 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G39370.1 | ubiquitin-specific protease 27. Encodes a ubiquitin-specific protease. | 0 |
| RefSeq | XP_037477831.1 | ubiquitin carboxyl-terminal hydrolase 27-like isoform X1 [Triticum dicoccoides] | 0 |
| Q9FPS0 | Ubiquitin carboxyl-terminal hydrolase 27 OS=Arabidopsis thaliana OX=3702 GN=UBP27 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8R7TIV8 | Ubiquitin carboxyl-terminal hydrolase OS=Triticum urartu OX=4572 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2AG043850.