Basic Information
Locus ID:
gene:TRIDC2AG043200
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
WD domain, G-beta repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2A | 509428092 | 509433660 | - | gene:TRIDC2AG043200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.43 | 75,517.48 Da | 40.84 | 71.67 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 253 | 285 | 0.0052 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 380 | 416 | 1.6E-5 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 338 | 374 | 4.7E-6 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 252 | 553 | 2.83E-50 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 238 | 584 | 1.3E-52 | IPR015943 |
| SMART | SM00320 | WD40_4 | 377 | 416 | 1.9E-11 | IPR001680 |
| SMART | SM00320 | WD40_4 | 247 | 286 | 1.2E-5 | IPR001680 |
| SMART | SM00320 | WD40_4 | 418 | 457 | 1.1 | IPR001680 |
| SMART | SM00320 | WD40_4 | 509 | 550 | 4.2 | IPR001680 |
| SMART | SM00320 | WD40_4 | 472 | 508 | 62.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 336 | 374 | 2.9E-9 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 254 | 287 | 11.049229 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 529 | 559 | 9.372231 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 343 | 375 | 11.711506 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 343 | 375 | 9.783781 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 254 | 287 | 13.315579 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 383 | 417 | 13.783434 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 383 | 417 | 11.418318 | - |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 537 | 551 | - | IPR019775 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 273 | 287 | 9.0E-7 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 403 | 417 | 9.0E-7 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 361 | 375 | 9.0E-7 | IPR020472 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 589 | 615 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 16 | 36 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G24320.1 | Transducin/WD40 repeat-like superfamily protein. | 0 |
| RefSeq | XP_037477807.1 | uncharacterized WD repeat-containing protein sll0163-like [Triticum dicoccoides] | 0 |
| Q9R037 | WD repeat-containing protein 44 OS=Rattus norvegicus OX=10116 GN=Wdr44 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6B0J5 | WD_REPEATS_REGION domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2AG043200.