Basic Information
Locus ID:
gene:TRIDC2AG040240
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
RING-type E3 ubiquitin transferase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2A | 457398206 | 457402371 | - | gene:TRIDC2AG040240 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.84 | 73,256.40 Da | 56.09 | 80.90 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF04564 | U-box domain | 287 | 358 | 5.5E-16 | IPR003613 |
| SUPERFAMILY | SSF57850 | RING/U-box | 285 | 359 | 1.77E-18 | - |
| SUPERFAMILY | SSF48371 | ARM repeat | 431 | 596 | 2.43E-13 | IPR016024 |
| Gene3D | G3DSA:1.25.10.10 | - | 431 | 605 | 2.3E-13 | IPR011989 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 283 | 363 | 6.4E-18 | IPR013083 |
| SMART | SM00504 | Ubox_2 | 290 | 353 | 3.8E-8 | IPR003613 |
| ProSiteProfiles | PS51698 | U-box domain profile. | 286 | 360 | 19.347313 | IPR003613 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 630 | 647 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 125 | 154 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 124 | 158 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 616 | 647 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 110 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 24 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_044453228.1 | U-box domain-containing protein 11-like [Triticum aestivum] | 0 |
| TrEMBL | A0A3B6AYF3 | RING-type E3 ubiquitin transferase OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2AG040240.